BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H02LP1|AL426104
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1448 888 0.0
>3x_Contig1448
Length = 10333
Score = 888 bits (441), Expect = 0.0
Identities = 481/494 (97%), Gaps = 4/494 (0%)
Strand = Plus / Plus
Query: 333 agmaaaatttgggtmmgaaattgcagtgttttcaatcammggataaatagcaaaaagttc 392
|| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 12 agcaaaatttgggtccgaaattgcagtgttttcaatcaccggataaatagcaaaaagttc 71
Query: 393 actgtaaagaggaaaaatgcttagatgaaaaagaaagcaccgcatcaatagtttgtgcga 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 actgtaaagaggaaaaatgcttagatgaaaaagaaagcaccgcatcaatagtttgtgcga 131
Query: 453 aataataatgggaaatggaccacaacggtccgaggttttggctcgagcggatttcttctg 512
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tataataatgggaaatggaccacaacggtccgaggttttggctcgagcggatttcttctg 191
Query: 513 cgggaagtttgggttgtagt-gaagacgagtaaaccagtaatatcctgttatttgaaaac 571
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cgggaagtttgggttgtagtagaagacgagtaaaccagtaatatcctgttatttgaaaac 251
Query: 572 tttatatatgcatttttaataatagagaatgatataggaagctaaaaaggcagtagttgt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tttatatatgcatttttaataatagagaatgatataggaagctaaaaaggcagtagttgt 311
Query: 632 tgctggcttagtacaatct--gtaagctggacccatggtagacttgatgaccaaggaacc 689
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgctggcttagtacaatcttgttaagctggacccatggtagacttgatgaccaaggaacc 371
Query: 690 gacgttttgccagttcttcttcaacaaggagaccaagaagttaacagacatcaagatttg 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gacgttttgccagttcttcttcaacaaggagaccaagaagttaacagacatcaagatttg 431
Query: 750 gttgaccaaagtgtcttcgtccatttcgacgttaccgacg-gcgacacaaaacacaagac 808
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 432 gttgaccaaagtgtcttcgtccatttcgacgttaccgacgagcgacagcaaacacaagac 491
Query: 809 cttcttcaattgga 822
||||||||||||||
Sbjct: 492 cttcttcaattgga 505
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6429
Number of Sequences: 1807
Number of extensions: 6429
Number of successful extensions: 137
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)